Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 AC004817.3-201ENST00000602957 2129 ntBASIC14.05□□□□□ -0.16
LINC00311Q8N616 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 LINC00982-205ENST00000420957 435 ntBASIC14.05□□□□□ -0.16
LINC00311Q8N616 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 SAPCD2P3-201ENST00000455031 850 ntBASIC14.05□□□□□ -0.16
LINC00311Q8N616 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 SCARNA2-201ENST00000458748 420 ntBASIC14.05□□□□□ -0.16
LINC00311Q8N616 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 KRT18P56-201ENST00000507275 550 ntBASIC14.05□□□□□ -0.16
LINC00311Q8N616 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 NKAPP1-205ENST00000585790 367 ntBASIC14.05□□□□□ -0.16
LINC00311Q8N616 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 NCF1C-201ENST00000438382 1427 ntBASIC14.05□□□□□ -0.16
LINC00311Q8N616 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00311Q8N616 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LINC00311Q8N616 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 FGFR3P6-201ENST00000457012 610 ntBASIC14.04□□□□□ -0.16
LINC00311Q8N616 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC00311Q8N616 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.04□□□□□ -0.16
LINC00311Q8N616 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00311Q8N616 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LINC00311Q8N616 AC008608.2-201ENST00000606089 416 ntBASIC14.04□□□□□ -0.16
LINC00311Q8N616 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00311Q8N616 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
LINC00311Q8N616 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LINC00311Q8N616 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00311Q8N616 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC00311Q8N616 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00311Q8N616 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00311Q8N616 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00311Q8N616 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms