Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 AL844908.2-201ENST00000609461 460 ntBASIC23.75■■□□□ 1.39
XRN1Q8IZH2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 IGHV3-72-202ENST00000621503 303 ntBASIC23.75■■□□□ 1.39
XRN1Q8IZH2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 LINC00895-201ENST00000629028 1637 ntBASIC23.74■■□□□ 1.39
XRN1Q8IZH2 CU639417.3-201ENST00000624240 1404 ntBASIC23.74■■□□□ 1.39
XRN1Q8IZH2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 WASH4P-201ENST00000564273 1246 ntBASIC23.74■■□□□ 1.39
XRN1Q8IZH2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 AL132655.2-201ENST00000596276 594 ntBASIC23.74■■□□□ 1.39
XRN1Q8IZH2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 AC004840.1-201ENST00000636359 365 ntBASIC23.74■■□□□ 1.39
XRN1Q8IZH2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
XRN1Q8IZH2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 AC105233.2-201ENST00000523697 349 ntBASIC23.73■■□□□ 1.39
XRN1Q8IZH2 AF228730.5-201ENST00000530288 346 ntBASIC23.73■■□□□ 1.39
XRN1Q8IZH2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 AC027307.3-201ENST00000594262 1100 ntBASIC23.73■■□□□ 1.39
XRN1Q8IZH2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 BANF1P1-201ENST00000553684 263 ntBASIC23.73■■□□□ 1.39
XRN1Q8IZH2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
XRN1Q8IZH2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 AL008721.1-201ENST00000609964 604 ntBASIC23.72■■□□□ 1.39
XRN1Q8IZH2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
XRN1Q8IZH2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
XRN1Q8IZH2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC23.71■■□□□ 1.39
XRN1Q8IZH2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
XRN1Q8IZH2 ATP5G2P4-201ENST00000442175 420 ntBASIC23.71■■□□□ 1.39
XRN1Q8IZH2 RARRES2P9-201ENST00000565168 469 ntBASIC23.71■■□□□ 1.39
XRN1Q8IZH2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
XRN1Q8IZH2 AC073389.1-201ENST00000595595 795 ntBASIC23.71■■□□□ 1.39
XRN1Q8IZH2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
XRN1Q8IZH2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.71■■□□□ 1.39
XRN1Q8IZH2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC23.71■■□□□ 1.39
XRN1Q8IZH2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.71■■□□□ 1.39
XRN1Q8IZH2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC23.71■■□□□ 1.39
XRN1Q8IZH2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
XRN1Q8IZH2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
XRN1Q8IZH2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
XRN1Q8IZH2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms