Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 AC097493.4-201ENST00000641197 219 ntBASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 KRT89P-201ENST00000620027 1478 ntBASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 AC012306.2-201ENST00000609350 630 ntBASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM42Q8IWZ5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.33■□□□□ 0.37
TRIM42Q8IWZ5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM42Q8IWZ5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
TRIM42Q8IWZ5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM42Q8IWZ5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM42Q8IWZ5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM42Q8IWZ5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TRIM42Q8IWZ5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.33■□□□□ 0.37
TRIM42Q8IWZ5 AC093525.9-201ENST00000624961 1746 ntBASIC17.33■□□□□ 0.37
TRIM42Q8IWZ5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM42Q8IWZ5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 LINC01568-207ENST00000641790 1380 ntBASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 C2orf69P3-201ENST00000565542 1120 ntBASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 AC010947.1-201ENST00000623454 693 ntBASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 PCDH8P1-201ENST00000428983 2773 ntBASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM42Q8IWZ5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms