Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 AC093525.9-201ENST00000624961 1746 ntBASIC18.06■□□□□ 0.48
RFX6Q8HWS3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.06■□□□□ 0.48
RFX6Q8HWS3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 AP002383.4-201ENST00000442518 975 ntBASIC18.06■□□□□ 0.48
RFX6Q8HWS3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 LINC00265-3P-201ENST00000447588 903 ntBASIC18.06■□□□□ 0.48
RFX6Q8HWS3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 TPSP2-201ENST00000561760 610 ntBASIC18.06■□□□□ 0.48
RFX6Q8HWS3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 Z69720.1-201ENST00000601483 472 ntBASIC18.06■□□□□ 0.48
RFX6Q8HWS3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 AC060834.1-201ENST00000443027 2032 ntBASIC18.06■□□□□ 0.48
RFX6Q8HWS3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX6Q8HWS3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 STK25P1-201ENST00000585406 838 ntBASIC18.05■□□□□ 0.48
RFX6Q8HWS3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 AC011467.2-201ENST00000598425 242 ntBASIC18.05■□□□□ 0.48
RFX6Q8HWS3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.05■□□□□ 0.48
RFX6Q8HWS3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.04■□□□□ 0.48
RFX6Q8HWS3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 TP73-AS1-210ENST00000637775 1455 ntBASIC18.04■□□□□ 0.48
RFX6Q8HWS3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 SLC25A1P3-201ENST00000395415 828 ntBASIC18.04■□□□□ 0.48
RFX6Q8HWS3 DRAXINP1-201ENST00000437611 948 ntBASIC18.04■□□□□ 0.48
RFX6Q8HWS3 STK19B-204ENST00000512515 211 ntBASIC18.04■□□□□ 0.48
RFX6Q8HWS3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms