Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 LINC00167-201ENST00000530583 1419 ntBASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 AL162727.3-201ENST00000635661 2787 ntBASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 RNF126P1-202ENST00000569893 925 ntBASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 AC004263.2-201ENST00000617183 678 ntBASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 AL353692.3-201ENST00000407031 1396 ntBASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATPAF1Q5TC12 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 PCED1CP-201ENST00000419887 785 ntBASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 KRT18P65-201ENST00000439811 1286 ntBASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
ATPAF1Q5TC12 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 DOC2GP-204ENST00000639052 2548 ntBASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms