Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 FAM86C2P-203ENST00000528684 1004 ntBASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 LINC00304-203ENST00000565008 1864 ntBASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 AC009113.1-201ENST00000570267 2443 ntBASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 AC243562.1-201ENST00000560672 389 ntBASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM71Q2Q1W2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 FAM58DP-201ENST00000428076 619 ntBASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 SPDYE11-202ENST00000450699 704 ntBASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 AC079140.1-201ENST00000508039 487 ntBASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 SPDYE9P-201ENST00000570642 692 ntBASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 MIR4515-201ENST00000584082 81 ntBASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 SPDYE10P-202ENST00000612005 668 ntBASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 SPDYE8P-202ENST00000612377 668 ntBASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM71Q2Q1W2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM71Q2Q1W2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TRIM71Q2Q1W2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM71Q2Q1W2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM71Q2Q1W2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM71Q2Q1W2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRIM71Q2Q1W2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM71Q2Q1W2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms