Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 MTMR9LP-203ENST00000426597 1545 ntBASIC15.03■□□□□ -0
UBA52P62987 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.03■□□□□ -0
UBA52P62987 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.03■□□□□ -0
UBA52P62987 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.03■□□□□ -0
UBA52P62987 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
UBA52P62987 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.03■□□□□ -0
UBA52P62987 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 MCCD1P1-208ENST00000445732 328 ntBASIC15.03■□□□□ -0
UBA52P62987 FAAHP1-202ENST00000446499 1238 ntBASIC15.03■□□□□ -0
UBA52P62987 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.03■□□□□ -0
UBA52P62987 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
UBA52P62987 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.03■□□□□ -0
UBA52P62987 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.03■□□□□ -0
UBA52P62987 AP002414.4-201ENST00000589764 1148 ntBASIC15.03■□□□□ -0
UBA52P62987 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.03■□□□□ -0
UBA52P62987 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.03■□□□□ -0
UBA52P62987 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.03■□□□□ -0
UBA52P62987 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.03■□□□□ -0
UBA52P62987 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.03■□□□□ -0
UBA52P62987 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.03■□□□□ -0
UBA52P62987 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.03■□□□□ -0
UBA52P62987 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
UBA52P62987 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.03■□□□□ -0
UBA52P62987 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.03■□□□□ -0
UBA52P62987 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.03■□□□□ -0
UBA52P62987 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.03■□□□□ -0
UBA52P62987 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBA52P62987 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UBA52P62987 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
UBA52P62987 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.02■□□□□ -0
UBA52P62987 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
UBA52P62987 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.02■□□□□ -0
UBA52P62987 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.02■□□□□ -0
UBA52P62987 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UBA52P62987 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.02■□□□□ -0
UBA52P62987 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UBA52P62987 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UBA52P62987 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.02■□□□□ -0
UBA52P62987 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.02■□□□□ -0
UBA52P62987 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UBA52P62987 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.02■□□□□ -0
UBA52P62987 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.02■□□□□ -0
UBA52P62987 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.02■□□□□ -0
UBA52P62987 AP002383.4-201ENST00000442518 975 ntBASIC15.02■□□□□ -0
UBA52P62987 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.02■□□□□ -0
UBA52P62987 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBA52P62987 KRT8P26-201ENST00000534154 1276 ntBASIC15.02■□□□□ -0
UBA52P62987 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.02■□□□□ -0
UBA52P62987 MIR3180-5-201ENST00000583743 153 ntBASIC15.02■□□□□ -0
UBA52P62987 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.02■□□□□ -0
UBA52P62987 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
UBA52P62987 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.02□□□□□ -0.01
UBA52P62987 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.02□□□□□ -0.01
UBA52P62987 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBA52P62987 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.02□□□□□ -0.01
UBA52P62987 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
UBA52P62987 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.02□□□□□ -0.01
UBA52P62987 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
UBA52P62987 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBA52P62987 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
UBA52P62987 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBA52P62987 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBA52P62987 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
UBA52P62987 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.02□□□□□ -0.01
UBA52P62987 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms