Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CPT1AP50416 FAM86GP-201ENST00000448322 971 ntBASIC19.11■□□□□ 0.65
CPT1AP50416 RN7SL589P-201ENST00000481268 310 ntBASIC19.11■□□□□ 0.65
CPT1AP50416 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.11■□□□□ 0.65
CPT1AP50416 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.11■□□□□ 0.65
CPT1AP50416 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.11■□□□□ 0.65
CPT1AP50416 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.11■□□□□ 0.65
CPT1AP50416 AC009093.7-201ENST00000623853 1223 ntBASIC19.11■□□□□ 0.65
CPT1AP50416 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.11■□□□□ 0.65
CPT1AP50416 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.11■□□□□ 0.65
CPT1AP50416 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.11■□□□□ 0.65
CPT1AP50416 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPT1AP50416 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPT1AP50416 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CPT1AP50416 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPT1AP50416 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CPT1AP50416 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CPT1AP50416 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.11■□□□□ 0.65
CPT1AP50416 AC009113.1-201ENST00000570267 2443 ntBASIC19.11■□□□□ 0.65
CPT1AP50416 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CPT1AP50416 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPT1AP50416 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CPT1AP50416 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.1■□□□□ 0.65
CPT1AP50416 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.1■□□□□ 0.65
CPT1AP50416 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.1■□□□□ 0.65
CPT1AP50416 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.1■□□□□ 0.65
CPT1AP50416 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 LINC00304-203ENST00000565008 1864 ntBASIC19.1■□□□□ 0.65
CPT1AP50416 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.1■□□□□ 0.65
CPT1AP50416 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.1■□□□□ 0.65
CPT1AP50416 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.1■□□□□ 0.65
CPT1AP50416 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.1■□□□□ 0.65
CPT1AP50416 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.1■□□□□ 0.65
CPT1AP50416 MIR4515-201ENST00000584082 81 ntBASIC19.1■□□□□ 0.65
CPT1AP50416 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.1■□□□□ 0.65
CPT1AP50416 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.1■□□□□ 0.65
CPT1AP50416 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.1■□□□□ 0.65
CPT1AP50416 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.1■□□□□ 0.65
CPT1AP50416 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.1■□□□□ 0.65
CPT1AP50416 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CPT1AP50416 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPT1AP50416 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CPT1AP50416 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPT1AP50416 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPT1AP50416 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPT1AP50416 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPT1AP50416 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CPT1AP50416 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CPT1AP50416 AC104581.1-202ENST00000635932 2618 ntBASIC19.09■□□□□ 0.65
CPT1AP50416 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.09■□□□□ 0.65
CPT1AP50416 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.09■□□□□ 0.65
CPT1AP50416 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPT1AP50416 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.09■□□□□ 0.65
CPT1AP50416 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPT1AP50416 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.09■□□□□ 0.65
CPT1AP50416 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.09■□□□□ 0.65
CPT1AP50416 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.09■□□□□ 0.65
CPT1AP50416 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPT1AP50416 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.09■□□□□ 0.65
CPT1AP50416 AL096865.1-201ENST00000606796 927 ntBASIC19.09■□□□□ 0.65
CPT1AP50416 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPT1AP50416 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.09■□□□□ 0.65
CPT1AP50416 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPT1AP50416 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPT1AP50416 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.09■□□□□ 0.65
CPT1AP50416 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.09■□□□□ 0.65
CPT1AP50416 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPT1AP50416 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CPT1AP50416 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPT1AP50416 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CPT1AP50416 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.09■□□□□ 0.65
CPT1AP50416 AC004408.2-201ENST00000623613 2777 ntBASIC19.09■□□□□ 0.65
CPT1AP50416 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPT1AP50416 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CPT1AP50416 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.08■□□□□ 0.65
CPT1AP50416 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPT1AP50416 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPT1AP50416 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CPT1AP50416 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPT1AP50416 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPT1AP50416 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPT1AP50416 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPT1AP50416 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPT1AP50416 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPT1AP50416 LYSMD4-203ENST00000378904 2122 ntBASIC19.08■□□□□ 0.64
CPT1AP50416 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms