Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
MTHFRP42898 ACTG1P4-201ENST00000425123 1122 ntBASIC18.11■□□□□ 0.49
MTHFRP42898 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.11■□□□□ 0.49
MTHFRP42898 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.11■□□□□ 0.49
MTHFRP42898 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.11■□□□□ 0.49
MTHFRP42898 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.11■□□□□ 0.49
MTHFRP42898 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.11■□□□□ 0.49
MTHFRP42898 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.11■□□□□ 0.49
MTHFRP42898 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MTHFRP42898 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MTHFRP42898 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.11■□□□□ 0.49
MTHFRP42898 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.11■□□□□ 0.49
MTHFRP42898 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MTHFRP42898 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTHFRP42898 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.11■□□□□ 0.49
MTHFRP42898 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.11■□□□□ 0.49
MTHFRP42898 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.1■□□□□ 0.49
MTHFRP42898 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
MTHFRP42898 AL031598.1-201ENST00000561511 1773 ntBASIC18.1■□□□□ 0.49
MTHFRP42898 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.1■□□□□ 0.49
MTHFRP42898 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.1■□□□□ 0.49
MTHFRP42898 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 AC006116.8-202ENST00000587620 1550 ntBASIC18.1■□□□□ 0.49
MTHFRP42898 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.1■□□□□ 0.49
MTHFRP42898 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.1■□□□□ 0.49
MTHFRP42898 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
MTHFRP42898 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.1■□□□□ 0.49
MTHFRP42898 AL513480.1-201ENST00000451731 511 ntBASIC18.1■□□□□ 0.49
MTHFRP42898 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
MTHFRP42898 AC190387.1-201ENST00000551683 408 ntBASIC18.1■□□□□ 0.49
MTHFRP42898 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 AC015911.4-201ENST00000588022 1070 ntBASIC18.1■□□□□ 0.49
MTHFRP42898 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.1■□□□□ 0.49
MTHFRP42898 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.1■□□□□ 0.49
MTHFRP42898 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.1■□□□□ 0.49
MTHFRP42898 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTHFRP42898 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.1■□□□□ 0.49
MTHFRP42898 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
MTHFRP42898 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.09■□□□□ 0.49
MTHFRP42898 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.09■□□□□ 0.49
MTHFRP42898 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.09■□□□□ 0.49
MTHFRP42898 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
MTHFRP42898 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.09■□□□□ 0.49
MTHFRP42898 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.09■□□□□ 0.49
MTHFRP42898 AC002056.1-201ENST00000395613 760 ntBASIC18.09■□□□□ 0.49
MTHFRP42898 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.09■□□□□ 0.49
MTHFRP42898 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
MTHFRP42898 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.09■□□□□ 0.49
MTHFRP42898 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.09■□□□□ 0.49
MTHFRP42898 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.09■□□□□ 0.49
MTHFRP42898 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
MTHFRP42898 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.09■□□□□ 0.49
MTHFRP42898 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.09■□□□□ 0.49
MTHFRP42898 AJ011932.1-201ENST00000621707 465 ntBASIC18.09■□□□□ 0.49
MTHFRP42898 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.09■□□□□ 0.49
MTHFRP42898 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
MTHFRP42898 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
MTHFRP42898 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTHFRP42898 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.08■□□□□ 0.49
MTHFRP42898 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.08■□□□□ 0.49
MTHFRP42898 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MTHFRP42898 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MTHFRP42898 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
MTHFRP42898 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MTHFRP42898 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MTHFRP42898 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms