Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL162727.3-201ENST00000635661 2787 ntBASIC17.57■□□□□ 0.4
RPA3P35244 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RPA3P35244 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RPA3P35244 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.57■□□□□ 0.4
RPA3P35244 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.57■□□□□ 0.4
RPA3P35244 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.57■□□□□ 0.4
RPA3P35244 AL645929.1-201ENST00000420084 975 ntBASIC17.57■□□□□ 0.4
RPA3P35244 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.57■□□□□ 0.4
RPA3P35244 AC113404.2-201ENST00000507884 177 ntBASIC17.57■□□□□ 0.4
RPA3P35244 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.57■□□□□ 0.4
RPA3P35244 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.57■□□□□ 0.4
RPA3P35244 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.57■□□□□ 0.4
RPA3P35244 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RPA3P35244 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.57■□□□□ 0.4
RPA3P35244 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.57■□□□□ 0.4
RPA3P35244 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.57■□□□□ 0.4
RPA3P35244 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.57■□□□□ 0.4
RPA3P35244 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.57■□□□□ 0.4
RPA3P35244 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RPA3P35244 RNF216P1-203ENST00000404404 2427 ntBASIC17.57■□□□□ 0.4
RPA3P35244 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.57■□□□□ 0.4
RPA3P35244 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.56■□□□□ 0.4
RPA3P35244 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 AC079328.2-201ENST00000561241 3354 ntBASIC17.56■□□□□ 0.4
RPA3P35244 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
RPA3P35244 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RPA3P35244 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 KRT18P65-201ENST00000439811 1286 ntBASIC17.56■□□□□ 0.4
RPA3P35244 SPDYE13P-201ENST00000445314 798 ntBASIC17.56■□□□□ 0.4
RPA3P35244 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.56■□□□□ 0.4
RPA3P35244 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.56■□□□□ 0.4
RPA3P35244 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.56■□□□□ 0.4
RPA3P35244 AL136038.3-201ENST00000561909 1096 ntBASIC17.56■□□□□ 0.4
RPA3P35244 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.56■□□□□ 0.4
RPA3P35244 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RPA3P35244 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.56■□□□□ 0.4
RPA3P35244 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RPA3P35244 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.56■□□□□ 0.4
RPA3P35244 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.56■□□□□ 0.4
RPA3P35244 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
RPA3P35244 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPA3P35244 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
RPA3P35244 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RPA3P35244 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
RPA3P35244 AC092053.1-201ENST00000605787 1936 ntBASIC17.55■□□□□ 0.4
RPA3P35244 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.55■□□□□ 0.4
RPA3P35244 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.55■□□□□ 0.4
RPA3P35244 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
RPA3P35244 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.55■□□□□ 0.4
RPA3P35244 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RPA3P35244 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.55■□□□□ 0.4
RPA3P35244 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms