Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTX3P26022 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.67■□□□□ 0.26
PTX3P26022 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.67■□□□□ 0.26
PTX3P26022 AC080080.1-201ENST00000625121 2420 ntBASIC16.67■□□□□ 0.26
PTX3P26022 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTX3P26022 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.67■□□□□ 0.26
PTX3P26022 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PTX3P26022 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.66■□□□□ 0.26
PTX3P26022 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.66■□□□□ 0.26
PTX3P26022 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTX3P26022 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PTX3P26022 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.66■□□□□ 0.26
PTX3P26022 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.66■□□□□ 0.26
PTX3P26022 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.66■□□□□ 0.26
PTX3P26022 KRT16P4-201ENST00000453883 522 ntBASIC16.66■□□□□ 0.26
PTX3P26022 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.66■□□□□ 0.26
PTX3P26022 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.66■□□□□ 0.26
PTX3P26022 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.66■□□□□ 0.26
PTX3P26022 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.66■□□□□ 0.26
PTX3P26022 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 AC009336.1-201ENST00000608941 1553 ntBASIC16.66■□□□□ 0.26
PTX3P26022 AC073592.5-201ENST00000624854 528 ntBASIC16.66■□□□□ 0.26
PTX3P26022 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.66■□□□□ 0.26
PTX3P26022 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.66■□□□□ 0.26
PTX3P26022 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.66■□□□□ 0.26
PTX3P26022 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTX3P26022 AC132938.5-201ENST00000624980 1813 ntBASIC16.66■□□□□ 0.26
PTX3P26022 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.65■□□□□ 0.26
PTX3P26022 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTX3P26022 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTX3P26022 OR6D1P-203ENST00000641209 4860 ntBASIC16.65■□□□□ 0.26
PTX3P26022 PMPCAP1-201ENST00000508114 1576 ntBASIC16.65■□□□□ 0.26
PTX3P26022 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.65■□□□□ 0.26
PTX3P26022 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.65■□□□□ 0.26
PTX3P26022 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 KLF4P1-201ENST00000412782 1185 ntBASIC16.65■□□□□ 0.26
PTX3P26022 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
PTX3P26022 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PTX3P26022 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.65■□□□□ 0.26
PTX3P26022 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.65■□□□□ 0.26
PTX3P26022 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.65■□□□□ 0.26
PTX3P26022 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PTX3P26022 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
PTX3P26022 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.65■□□□□ 0.26
PTX3P26022 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTX3P26022 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.65■□□□□ 0.26
PTX3P26022 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTX3P26022 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTX3P26022 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTX3P26022 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTX3P26022 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTX3P26022 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.64■□□□□ 0.25
PTX3P26022 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.64■□□□□ 0.25
PTX3P26022 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTX3P26022 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PTX3P26022 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PTX3P26022 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PTX3P26022 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PTX3P26022 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTX3P26022 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PTX3P26022 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTX3P26022 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTX3P26022 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTX3P26022 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PTX3P26022 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.64■□□□□ 0.25
PTX3P26022 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.64■□□□□ 0.25
PTX3P26022 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.64■□□□□ 0.25
PTX3P26022 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.64■□□□□ 0.25
PTX3P26022 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.64■□□□□ 0.25
PTX3P26022 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms