Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MSR1P21757 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MSR1P21757 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MSR1P21757 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MSR1P21757 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.37■□□□□ 0.05
MSR1P21757 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MSR1P21757 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.37■□□□□ 0.05
MSR1P21757 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.37■□□□□ 0.05
MSR1P21757 POM121L3P-201ENST00000419331 1163 ntBASIC15.37■□□□□ 0.05
MSR1P21757 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
MSR1P21757 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.37■□□□□ 0.05
MSR1P21757 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.37■□□□□ 0.05
MSR1P21757 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.37■□□□□ 0.05
MSR1P21757 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.37■□□□□ 0.05
MSR1P21757 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
MSR1P21757 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.37■□□□□ 0.05
MSR1P21757 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MSR1P21757 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MSR1P21757 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
MSR1P21757 AC007326.2-201ENST00000624224 7579 ntBASIC15.37■□□□□ 0.05
MSR1P21757 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.37■□□□□ 0.05
MSR1P21757 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MSR1P21757 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MSR1P21757 INTS4P1-201ENST00000438455 1935 ntBASIC15.37■□□□□ 0.05
MSR1P21757 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.37■□□□□ 0.05
MSR1P21757 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MSR1P21757 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MSR1P21757 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.36■□□□□ 0.05
MSR1P21757 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MSR1P21757 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.36■□□□□ 0.05
MSR1P21757 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MSR1P21757 AC106820.2-201ENST00000563775 3264 ntBASIC15.36■□□□□ 0.05
MSR1P21757 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MSR1P21757 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MSR1P21757 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MSR1P21757 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MSR1P21757 AC003669.1-201ENST00000334569 611 ntBASIC15.36■□□□□ 0.05
MSR1P21757 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
MSR1P21757 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MSR1P21757 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.36■□□□□ 0.05
MSR1P21757 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.36■□□□□ 0.05
MSR1P21757 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.36■□□□□ 0.05
MSR1P21757 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.36■□□□□ 0.05
MSR1P21757 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MSR1P21757 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.36■□□□□ 0.05
MSR1P21757 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
MSR1P21757 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.36■□□□□ 0.05
MSR1P21757 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MSR1P21757 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.36■□□□□ 0.05
MSR1P21757 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MSR1P21757 AC116353.5-201ENST00000638148 1699 ntBASIC15.35■□□□□ 0.05
MSR1P21757 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MSR1P21757 AP001094.4-201ENST00000579008 2176 ntBASIC15.35■□□□□ 0.05
MSR1P21757 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MSR1P21757 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MSR1P21757 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MSR1P21757 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.35■□□□□ 0.05
MSR1P21757 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MSR1P21757 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.35■□□□□ 0.05
MSR1P21757 RCN1P2-201ENST00000398357 915 ntBASIC15.35■□□□□ 0.05
MSR1P21757 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.35■□□□□ 0.05
MSR1P21757 KLF4P1-201ENST00000412782 1185 ntBASIC15.35■□□□□ 0.05
MSR1P21757 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.35■□□□□ 0.05
MSR1P21757 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.35■□□□□ 0.05
MSR1P21757 UPK3BP1-201ENST00000428678 509 ntBASIC15.35■□□□□ 0.05
MSR1P21757 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MSR1P21757 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MSR1P21757 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.35■□□□□ 0.05
MSR1P21757 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.35■□□□□ 0.05
MSR1P21757 STK19B-204ENST00000512515 211 ntBASIC15.35■□□□□ 0.05
MSR1P21757 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MSR1P21757 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.35■□□□□ 0.05
MSR1P21757 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.35■□□□□ 0.05
MSR1P21757 AC099336.1-202ENST00000602961 463 ntBASIC15.35■□□□□ 0.05
MSR1P21757 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MSR1P21757 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.35■□□□□ 0.05
MSR1P21757 AD001527.2-201ENST00000622994 785 ntBASIC15.35■□□□□ 0.05
MSR1P21757 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MSR1P21757 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.35■□□□□ 0.05
MSR1P21757 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MSR1P21757 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MSR1P21757 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MSR1P21757 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MSR1P21757 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MSR1P21757 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.34■□□□□ 0.05
MSR1P21757 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MSR1P21757 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.34■□□□□ 0.05
MSR1P21757 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MSR1P21757 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MSR1P21757 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
MSR1P21757 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MSR1P21757 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MSR1P21757 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.34■□□□□ 0.05
MSR1P21757 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.34■□□□□ 0.05
MSR1P21757 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.34■□□□□ 0.05
MSR1P21757 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.34■□□□□ 0.05
MSR1P21757 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.34■□□□□ 0.05
MSR1P21757 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MSR1P21757 AC073592.5-201ENST00000624854 528 ntBASIC15.34■□□□□ 0.05
MSR1P21757 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms