Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFP01375 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFP01375 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFP01375 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFP01375 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFP01375 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TNFP01375 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFP01375 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.92■□□□□ 0.3
TNFP01375 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFP01375 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFP01375 AL390961.4-201ENST00000623958 2535 ntBASIC16.92■□□□□ 0.3
TNFP01375 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFP01375 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TNFP01375 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
TNFP01375 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFP01375 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFP01375 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFP01375 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFP01375 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFP01375 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFP01375 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TNFP01375 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFP01375 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFP01375 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.91■□□□□ 0.3
TNFP01375 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFP01375 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFP01375 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFP01375 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFP01375 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.91■□□□□ 0.3
TNFP01375 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.91■□□□□ 0.3
TNFP01375 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.91■□□□□ 0.3
TNFP01375 AC092865.6-201ENST00000642101 219 ntBASIC16.91■□□□□ 0.3
TNFP01375 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFP01375 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFP01375 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFP01375 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFP01375 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFP01375 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFP01375 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFP01375 AC133963.1-201ENST00000504166 1679 ntBASIC16.91■□□□□ 0.3
TNFP01375 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFP01375 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFP01375 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TNFP01375 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFP01375 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFP01375 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFP01375 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFP01375 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TNFP01375 AL355312.1-201ENST00000407115 2176 ntBASIC16.9■□□□□ 0.3
TNFP01375 IGLL3P-201ENST00000412472 434 ntBASIC16.9■□□□□ 0.3
TNFP01375 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFP01375 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFP01375 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.9■□□□□ 0.3
TNFP01375 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.9■□□□□ 0.3
TNFP01375 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.9■□□□□ 0.3
TNFP01375 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TNFP01375 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFP01375 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFP01375 AC007064.4-201ENST00000637740 555 ntBASIC16.9■□□□□ 0.3
TNFP01375 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TNFP01375 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.9■□□□□ 0.3
TNFP01375 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFP01375 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TNFP01375 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFP01375 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFP01375 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
TNFP01375 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFP01375 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.9■□□□□ 0.3
TNFP01375 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.9■□□□□ 0.3
TNFP01375 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFP01375 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TNFP01375 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TNFP01375 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
TNFP01375 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.89■□□□□ 0.29
TNFP01375 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.89■□□□□ 0.29
TNFP01375 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TNFP01375 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TNFP01375 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
TNFP01375 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.89■□□□□ 0.29
TNFP01375 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 AC005829.1-201ENST00000570002 483 ntBASIC16.89■□□□□ 0.29
TNFP01375 OR7E47P-204ENST00000575924 449 ntBASIC16.89■□□□□ 0.29
TNFP01375 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.89■□□□□ 0.29
TNFP01375 AC004877.2-201ENST00000623941 599 ntBASIC16.89■□□□□ 0.29
TNFP01375 AC079781.4-201ENST00000641908 219 ntBASIC16.89■□□□□ 0.29
TNFP01375 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
TNFP01375 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFP01375 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TNFP01375 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms