Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD2O14647 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHD2O14647 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC23.8■■□□□ 1.4
CHD2O14647 RARRES2P9-201ENST00000565168 469 ntBASIC23.8■■□□□ 1.4
CHD2O14647 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC23.8■■□□□ 1.4
CHD2O14647 AC017083.2-201ENST00000608069 979 ntBASIC23.8■■□□□ 1.4
CHD2O14647 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CHD2O14647 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CHD2O14647 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD2O14647 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD2O14647 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CHD2O14647 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHD2O14647 HLA-DQB1-201ENST00000374943 1656 ntBASIC23.79■■□□□ 1.4
CHD2O14647 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD2O14647 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHD2O14647 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC23.79■■□□□ 1.4
CHD2O14647 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC23.79■■□□□ 1.4
CHD2O14647 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CHD2O14647 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
CHD2O14647 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHD2O14647 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
CHD2O14647 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CHD2O14647 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC23.79■■□□□ 1.4
CHD2O14647 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD2O14647 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC23.79■■□□□ 1.4
CHD2O14647 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD2O14647 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHD2O14647 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHD2O14647 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CHD2O14647 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC23.78■■□□□ 1.4
CHD2O14647 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CHD2O14647 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD2O14647 LINC00304-203ENST00000565008 1864 ntBASIC23.78■■□□□ 1.4
CHD2O14647 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD2O14647 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC23.78■■□□□ 1.4
CHD2O14647 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC23.78■■□□□ 1.4
CHD2O14647 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC23.78■■□□□ 1.4
CHD2O14647 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC23.78■■□□□ 1.4
CHD2O14647 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHD2O14647 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD2O14647 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD2O14647 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC23.78■■□□□ 1.4
CHD2O14647 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC23.78■■□□□ 1.4
CHD2O14647 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CHD2O14647 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC23.78■■□□□ 1.4
CHD2O14647 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD2O14647 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD2O14647 REXO1L9P-201ENST00000604264 2108 ntBASIC23.78■■□□□ 1.4
CHD2O14647 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHD2O14647 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD2O14647 PTPA-220ENST00000436883 532 ntTSL 4 BASIC23.77■■□□□ 1.4
CHD2O14647 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD2O14647 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD2O14647 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC23.77■■□□□ 1.4
CHD2O14647 AC073389.1-201ENST00000595595 795 ntBASIC23.77■■□□□ 1.4
CHD2O14647 RNA5-8SN1-201ENST00000610460 153 ntBASIC23.77■■□□□ 1.4
CHD2O14647 RNA5-8SN5-202ENST00000612463 153 ntBASIC23.77■■□□□ 1.4
CHD2O14647 RNA5-8SN4-201ENST00000613359 153 ntBASIC23.77■■□□□ 1.4
CHD2O14647 RNA5-8SN5-201ENST00000619471 153 ntBASIC23.77■■□□□ 1.4
CHD2O14647 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD2O14647 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHD2O14647 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD2O14647 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD2O14647 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD2O14647 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHD2O14647 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD2O14647 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC23.77■■□□□ 1.4
CHD2O14647 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CHD2O14647 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CHD2O14647 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CHD2O14647 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD2O14647 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD2O14647 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC23.77■■□□□ 1.4
CHD2O14647 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC23.77■■□□□ 1.4
CHD2O14647 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC23.77■■□□□ 1.4
CHD2O14647 AL138918.1-201ENST00000568306 659 ntBASIC23.77■■□□□ 1.4
CHD2O14647 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD2O14647 AC018529.1-201ENST00000613063 361 ntBASIC23.77■■□□□ 1.4
CHD2O14647 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
CHD2O14647 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD2O14647 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD2O14647 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD2O14647 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD2O14647 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD2O14647 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD2O14647 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC23.76■■□□□ 1.39
CHD2O14647 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD2O14647 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC23.76■■□□□ 1.39
CHD2O14647 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
CHD2O14647 AC132938.2-201ENST00000579188 680 ntBASIC23.76■■□□□ 1.39
CHD2O14647 AL591163.1-201ENST00000641757 987 ntBASIC23.76■■□□□ 1.39
CHD2O14647 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD2O14647 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHD2O14647 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD2O14647 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHD2O14647 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD2O14647 STK4-201ENST00000372801 2038 ntTSL 2 BASIC23.75■■□□□ 1.39
CHD2O14647 AL080243.2-201ENST00000418783 582 ntBASIC23.75■■□□□ 1.39
CHD2O14647 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC23.75■■□□□ 1.39
CHD2O14647 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms