Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 TCAF2P1-201ENST00000291129 2421 ntBASIC18.88■□□□□ 0.61
CCDC66A2RUB6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC66A2RUB6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC66A2RUB6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 CYP2D8P-201ENST00000433633 1490 ntBASIC18.86■□□□□ 0.61
CCDC66A2RUB6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 NAPSB-206ENST00000562112 1266 ntBASIC18.86■□□□□ 0.61
CCDC66A2RUB6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.86■□□□□ 0.61
CCDC66A2RUB6 AC010947.1-201ENST00000623454 693 ntBASIC18.86■□□□□ 0.61
CCDC66A2RUB6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 AL662844.4-201ENST00000606367 2838 ntBASIC18.86■□□□□ 0.61
CCDC66A2RUB6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC66A2RUB6 AC133963.1-201ENST00000504166 1679 ntBASIC18.85■□□□□ 0.61
CCDC66A2RUB6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 AC099063.4-201ENST00000641099 1602 ntBASIC18.85■□□□□ 0.61
CCDC66A2RUB6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 LINC00167-201ENST00000530583 1419 ntBASIC18.85■□□□□ 0.61
CCDC66A2RUB6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 AC026691.1-201ENST00000602502 2017 ntBASIC18.85■□□□□ 0.61
CCDC66A2RUB6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 PVRIG2P-201ENST00000435460 978 ntBASIC18.85■□□□□ 0.61
CCDC66A2RUB6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms