Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC25.44■■□□□ 1.66
HFM1A2PYH4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 AC139713.2-201ENST00000641328 2723 ntBASIC25.44■■□□□ 1.66
HFM1A2PYH4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC25.44■■□□□ 1.66
HFM1A2PYH4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC25.44■■□□□ 1.66
HFM1A2PYH4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC25.44■■□□□ 1.66
HFM1A2PYH4 ADH5P3-201ENST00000433842 1137 ntBASIC25.44■■□□□ 1.66
HFM1A2PYH4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
HFM1A2PYH4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC25.44■■□□□ 1.66
HFM1A2PYH4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC25.44■■□□□ 1.66
HFM1A2PYH4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC25.44■■□□□ 1.66
HFM1A2PYH4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
HFM1A2PYH4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HFM1A2PYH4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HFM1A2PYH4 BCAR1-209ENST00000546196 1340 ntBASIC25.43■■□□□ 1.66
HFM1A2PYH4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
HFM1A2PYH4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HFM1A2PYH4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HFM1A2PYH4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HFM1A2PYH4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HFM1A2PYH4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HFM1A2PYH4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
HFM1A2PYH4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HFM1A2PYH4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC25.43■■□□□ 1.66
HFM1A2PYH4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
HFM1A2PYH4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC25.43■■□□□ 1.66
HFM1A2PYH4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
HFM1A2PYH4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC25.43■■□□□ 1.66
HFM1A2PYH4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC25.43■■□□□ 1.66
HFM1A2PYH4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC25.43■■□□□ 1.66
HFM1A2PYH4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC25.43■■□□□ 1.66
HFM1A2PYH4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HFM1A2PYH4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HFM1A2PYH4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HFM1A2PYH4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HFM1A2PYH4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC25.43■■□□□ 1.66
HFM1A2PYH4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
HFM1A2PYH4 SLC22A20-204ENST00000530038 1673 ntBASIC25.42■■□□□ 1.66
HFM1A2PYH4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
HFM1A2PYH4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
HFM1A2PYH4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC25.42■■□□□ 1.66
HFM1A2PYH4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC25.42■■□□□ 1.66
HFM1A2PYH4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HFM1A2PYH4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC25.42■■□□□ 1.66
HFM1A2PYH4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC25.42■■□□□ 1.66
HFM1A2PYH4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC25.42■■□□□ 1.66
HFM1A2PYH4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC25.42■■□□□ 1.66
HFM1A2PYH4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC25.42■■□□□ 1.66
HFM1A2PYH4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
HFM1A2PYH4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
HFM1A2PYH4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HFM1A2PYH4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HFM1A2PYH4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC25.42■■□□□ 1.66
HFM1A2PYH4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC25.42■■□□□ 1.66
HFM1A2PYH4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HFM1A2PYH4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HFM1A2PYH4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC25.41■■□□□ 1.66
HFM1A2PYH4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
HFM1A2PYH4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC25.41■■□□□ 1.66
HFM1A2PYH4 AL645608.8-201ENST00000606034 2086 ntBASIC25.41■■□□□ 1.66
HFM1A2PYH4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HFM1A2PYH4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC25.41■■□□□ 1.66
HFM1A2PYH4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
HFM1A2PYH4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC25.41■■□□□ 1.66
HFM1A2PYH4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC25.41■■□□□ 1.66
HFM1A2PYH4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC25.41■■□□□ 1.66
HFM1A2PYH4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC25.41■■□□□ 1.66
HFM1A2PYH4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC25.41■■□□□ 1.66
HFM1A2PYH4 AC023141.13-201ENST00000604991 943 ntBASIC25.41■■□□□ 1.66
HFM1A2PYH4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HFM1A2PYH4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC25.41■■□□□ 1.66
HFM1A2PYH4 AC025580.3-201ENST00000617932 1424 ntBASIC25.41■■□□□ 1.66
HFM1A2PYH4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HFM1A2PYH4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HFM1A2PYH4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
HFM1A2PYH4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HFM1A2PYH4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
HFM1A2PYH4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HFM1A2PYH4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
HFM1A2PYH4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HFM1A2PYH4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC25.4■■□□□ 1.66
HFM1A2PYH4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC25.4■■□□□ 1.66
HFM1A2PYH4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
HFM1A2PYH4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HFM1A2PYH4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms