Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV9S1A1TA0A576 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.49■□□□□ 0.39
TCRBV9S1A1TA0A576 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV9S1A1TA0A576 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV9S1A1TA0A576 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV9S1A1TA0A576 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV9S1A1TA0A576 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.49■□□□□ 0.39
TCRBV9S1A1TA0A576 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV9S1A1TA0A576 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV9S1A1TA0A576 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 RN7SL606P-201ENST00000472779 293 ntBASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 AC122714.2-201ENST00000502787 707 ntBASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 AL138831.2-201ENST00000606564 490 ntBASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 AC073912.3-201ENST00000624414 853 ntBASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 EGFEM1P-202ENST00000431685 1563 ntBASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV9S1A1TA0A576 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 GUSBP12-201ENST00000513727 720 ntBASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 AC005336.2-201ENST00000593183 939 ntBASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 DOC2GP-204ENST00000639052 2548 ntBASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 KRT8P10-201ENST00000450021 1447 ntBASIC17.47■□□□□ 0.39
TCRBV9S1A1TA0A576 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 AL845331.1-201ENST00000424978 1190 ntBASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms