Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.64■□□□□ 0.42
TCRBV7S3A2A0A539 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TCRBV7S3A2A0A539 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TCRBV7S3A2A0A539 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 FAM86EP-206ENST00000510506 987 ntBASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 AC111152.3-201ENST00000569699 673 ntBASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 NTF6B-201ENST00000591913 560 ntBASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TCRBV7S3A2A0A539 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 AC079328.2-201ENST00000561241 3354 ntBASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 EGFEM1P-202ENST00000431685 1563 ntBASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 AC246785.2-201ENST00000432512 513 ntBASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 KRT18P21-201ENST00000515767 1272 ntBASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV7S3A2A0A539 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 AC009336.1-201ENST00000608941 1553 ntBASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 CHCHD2P8-201ENST00000429873 447 ntBASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 AC011467.2-201ENST00000598425 242 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms