Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 KRT8P47-201ENST00000604727 1398 ntBASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 DRAXINP1-201ENST00000437611 948 ntBASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 MIR3652-201ENST00000579335 131 ntBASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 MIR3180-1-201ENST00000580374 94 ntBASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 MIR3180-3-201ENST00000584616 94 ntBASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 AL691432.3-201ENST00000621860 400 ntBASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 TNRC18P3-201ENST00000441896 2691 ntBASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 AL118508.1-201ENST00000613502 2345 ntBASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 AC097374.2-201ENST00000618617 1306 ntBASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 AP002383.4-201ENST00000442518 975 ntBASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 NUS1P1-201ENST00000446295 882 ntBASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 RNF126P1-202ENST00000569893 925 ntBASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGB3Q9Y5G1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB3Q9Y5G1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHGB3Q9Y5G1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHGB3Q9Y5G1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHGB3Q9Y5G1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB3Q9Y5G1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB3Q9Y5G1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB3Q9Y5G1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB3Q9Y5G1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB3Q9Y5G1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB3Q9Y5G1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB3Q9Y5G1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms