Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
PDZRN3Q9UPQ7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDZRN3Q9UPQ7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PDZRN3Q9UPQ7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDZRN3Q9UPQ7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.4■■□□□ 1.18
PDZRN3Q9UPQ7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PDZRN3Q9UPQ7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PDZRN3Q9UPQ7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PDZRN3Q9UPQ7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.39■■□□□ 1.18
PDZRN3Q9UPQ7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC22.39■■□□□ 1.18
PDZRN3Q9UPQ7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 LINC00602-201ENST00000629776 2065 ntBASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 AC009947.1-201ENST00000444350 727 ntBASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
PDZRN3Q9UPQ7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 AP002414.3-201ENST00000589352 1468 ntBASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC22.38■■□□□ 1.17
PDZRN3Q9UPQ7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 AC097374.2-201ENST00000618617 1306 ntBASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 AC211486.1-202ENST00000416371 468 ntBASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 DNAJB3-202ENST00000449667 1266 ntBASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 AC211476.1-201ENST00000503899 468 ntBASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC22.37■■□□□ 1.17
PDZRN3Q9UPQ7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
PDZRN3Q9UPQ7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDZRN3Q9UPQ7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDZRN3Q9UPQ7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDZRN3Q9UPQ7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PDZRN3Q9UPQ7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDZRN3Q9UPQ7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC22.36■■□□□ 1.17
PDZRN3Q9UPQ7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.36■■□□□ 1.17
PDZRN3Q9UPQ7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDZRN3Q9UPQ7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC22.36■■□□□ 1.17
PDZRN3Q9UPQ7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms