Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 PI4KAP1-204ENST00000612579 1703 ntBASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 AC010327.4-202ENST00000591484 748 ntBASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 LYSMD4-203ENST00000378904 2122 ntBASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 IGLL3P-201ENST00000412472 434 ntBASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 OR7E47P-204ENST00000575924 449 ntBASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 MTDHP5-201ENST00000598980 586 ntBASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND2AQ9ULE3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 AC002310.6-201ENST00000624451 1377 ntBASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 AL355312.1-201ENST00000407115 2176 ntBASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 AC133963.1-201ENST00000504166 1679 ntBASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 AC112482.1-201ENST00000492080 688 ntBASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 MIR3687-2-201ENST00000577708 61 ntBASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 MIR3687-1-201ENST00000614492 61 ntBASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.97■□□□□ 0.95
DENND2AQ9ULE3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 AC018845.2-201ENST00000568326 409 ntBASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 BCL2-203ENST00000589955 5011 ntBASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
DENND2AQ9ULE3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
DENND2AQ9ULE3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.95■□□□□ 0.94
DENND2AQ9ULE3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms