Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 AL118508.1-201ENST00000613502 2345 ntBASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 SPDYE13P-201ENST00000445314 798 ntBASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 FAM86EP-206ENST00000510506 987 ntBASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 AC091076.1-201ENST00000610741 619 ntBASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIN7CQ9NUP9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 AC005332.1-201ENST00000577698 1310 ntBASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 PCED1CP-201ENST00000419887 785 ntBASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 AC005104.2-201ENST00000427818 678 ntBASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms