Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BLOC1S4Q9NUP1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
BLOC1S4Q9NUP1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 AC021087.4-201ENST00000563761 564 ntBASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 AC025062.2-201ENST00000605477 670 ntBASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 AL353135.1-201ENST00000606729 504 ntBASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 AL691432.3-201ENST00000621860 400 ntBASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BLOC1S4Q9NUP1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BLOC1S4Q9NUP1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BLOC1S4Q9NUP1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
BLOC1S4Q9NUP1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
BLOC1S4Q9NUP1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
BLOC1S4Q9NUP1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
BLOC1S4Q9NUP1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
BLOC1S4Q9NUP1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 TP73-AS1-207ENST00000624167 988 ntBASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BLOC1S4Q9NUP1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms