Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
HIPK3Q9H422 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HIPK3Q9H422 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HIPK3Q9H422 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
HIPK3Q9H422 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.89■□□□□ 0.62
HIPK3Q9H422 AL135999.2-201ENST00000622438 1686 ntBASIC18.89■□□□□ 0.61
HIPK3Q9H422 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 MIR943-201ENST00000401286 94 ntBASIC18.89■□□□□ 0.61
HIPK3Q9H422 AC236430.1-201ENST00000402231 743 ntBASIC18.89■□□□□ 0.61
HIPK3Q9H422 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 AC087641.1-201ENST00000557561 1021 ntBASIC18.89■□□□□ 0.61
HIPK3Q9H422 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 AL645728.2-201ENST00000641974 660 ntBASIC18.89■□□□□ 0.61
HIPK3Q9H422 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 TUBB3P1-201ENST00000405796 1332 ntBASIC18.89■□□□□ 0.61
HIPK3Q9H422 AC063926.2-201ENST00000623766 1308 ntBASIC18.89■□□□□ 0.61
HIPK3Q9H422 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.89■□□□□ 0.61
HIPK3Q9H422 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 AC135776.1-201ENST00000319817 2481 ntBASIC18.89■□□□□ 0.61
HIPK3Q9H422 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK3Q9H422 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 TFAMP1-201ENST00000412727 736 ntBASIC18.88■□□□□ 0.61
HIPK3Q9H422 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 AL512356.2-201ENST00000546955 174 ntBASIC18.88■□□□□ 0.61
HIPK3Q9H422 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 AC046185.3-201ENST00000623228 1824 ntBASIC18.88■□□□□ 0.61
HIPK3Q9H422 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.88■□□□□ 0.61
HIPK3Q9H422 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK3Q9H422 NEFHP1-201ENST00000412845 2629 ntBASIC18.87■□□□□ 0.61
HIPK3Q9H422 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK3Q9H422 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK3Q9H422 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK3Q9H422 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK3Q9H422 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK3Q9H422 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
HIPK3Q9H422 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.87■□□□□ 0.61
HIPK3Q9H422 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.87■□□□□ 0.61
HIPK3Q9H422 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.87■□□□□ 0.61
HIPK3Q9H422 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK3Q9H422 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.87■□□□□ 0.61
HIPK3Q9H422 FAM58DP-201ENST00000428076 619 ntBASIC18.87■□□□□ 0.61
HIPK3Q9H422 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK3Q9H422 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.87■□□□□ 0.61
HIPK3Q9H422 AC002472.2-201ENST00000442739 958 ntBASIC18.87■□□□□ 0.61
HIPK3Q9H422 KLF2P3-201ENST00000451977 1087 ntBASIC18.87■□□□□ 0.61
HIPK3Q9H422 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.87■□□□□ 0.61
HIPK3Q9H422 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK3Q9H422 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
HIPK3Q9H422 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.87■□□□□ 0.61
HIPK3Q9H422 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms