Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 SIRPAP1-201ENST00000448467 1770 ntBASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 ADH5P3-201ENST00000433842 1137 ntBASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 ATP5G2P4-201ENST00000442175 420 ntBASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 AC125807.1-201ENST00000483097 614 ntBASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
UBE2OQ9C0C9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2OQ9C0C9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2OQ9C0C9 FO538757.1-201ENST00000623083 1397 ntBASIC19.08■□□□□ 0.65
UBE2OQ9C0C9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2OQ9C0C9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2OQ9C0C9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2OQ9C0C9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
UBE2OQ9C0C9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2OQ9C0C9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 NME2P1-201ENST00000426182 414 ntBASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 AL512356.2-201ENST00000546955 174 ntBASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
UBE2OQ9C0C9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 SPDYE11-202ENST00000450699 704 ntBASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 SPDYE9P-201ENST00000570642 692 ntBASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 SPDYE10P-202ENST00000612005 668 ntBASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 SPDYE8P-202ENST00000612377 668 ntBASIC19.07■□□□□ 0.64
UBE2OQ9C0C9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms