Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NBPF4Q96M43 CD99-202ENST00000381180 530 ntTSL 2 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 AC243562.1-201ENST00000560672 389 ntBASIC22.7■■□□□ 1.22
NBPF4Q96M43 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NBPF4Q96M43 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
NBPF4Q96M43 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NBPF4Q96M43 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NBPF4Q96M43 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NBPF4Q96M43 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.7■■□□□ 1.22
NBPF4Q96M43 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NBPF4Q96M43 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NBPF4Q96M43 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
NBPF4Q96M43 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NBPF4Q96M43 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NBPF4Q96M43 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NBPF4Q96M43 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NBPF4Q96M43 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NBPF4Q96M43 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NBPF4Q96M43 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NBPF4Q96M43 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NBPF4Q96M43 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NBPF4Q96M43 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
NBPF4Q96M43 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 NME9-203ENST00000383180 2133 ntTSL 2 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 AL035633.1-201ENST00000406139 838 ntBASIC22.68■■□□□ 1.22
NBPF4Q96M43 HMGA1P7-201ENST00000406908 502 ntBASIC22.68■■□□□ 1.22
NBPF4Q96M43 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 FAM58DP-201ENST00000428076 619 ntBASIC22.68■■□□□ 1.22
NBPF4Q96M43 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 AC079140.1-201ENST00000508039 487 ntBASIC22.68■■□□□ 1.22
NBPF4Q96M43 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 THTPA-204ENST00000554970 569 ntTSL 4 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 THTPA-206ENST00000556015 535 ntTSL 3 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 INO80E-210ENST00000567705 880 ntTSL 3 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 MIR4515-201ENST00000584082 81 ntBASIC22.68■■□□□ 1.22
NBPF4Q96M43 INO80C-206ENST00000586489 594 ntTSL 3 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NBPF4Q96M43 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC22.68■■□□□ 1.22
NBPF4Q96M43 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NBPF4Q96M43 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NBPF4Q96M43 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NBPF4Q96M43 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NBPF4Q96M43 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NBPF4Q96M43 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NBPF4Q96M43 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NBPF4Q96M43 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC22.67■■□□□ 1.22
NBPF4Q96M43 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms