Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 AP002414.4-201ENST00000589764 1148 ntBASIC17.71■□□□□ 0.43
RTP4Q96DX8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 NSUN5P1-202ENST00000421140 1535 ntBASIC17.71■□□□□ 0.43
RTP4Q96DX8 NSUN5P2-203ENST00000457352 1529 ntBASIC17.71■□□□□ 0.43
RTP4Q96DX8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.71■□□□□ 0.43
RTP4Q96DX8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTP4Q96DX8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
RTP4Q96DX8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
RTP4Q96DX8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 TOB2P1-201ENST00000469761 992 ntBASIC17.7■□□□□ 0.42
RTP4Q96DX8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTP4Q96DX8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.7■□□□□ 0.42
RTP4Q96DX8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 AC114341.1-201ENST00000618070 349 ntBASIC17.69■□□□□ 0.42
RTP4Q96DX8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 AP000867.4-201ENST00000641616 219 ntBASIC17.69■□□□□ 0.42
RTP4Q96DX8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.69■□□□□ 0.42
RTP4Q96DX8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTP4Q96DX8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms