Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 SPDYE21P-201ENST00000413323 827 ntBASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 RNA5SP419-201ENST00000515908 135 ntBASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 IGHV3-52-201ENST00000519770 353 ntBASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 RPS2P1-201ENST00000434010 821 ntBASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 HNRNPDP1-201ENST00000439535 754 ntBASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 MTDHP4-201ENST00000600287 670 ntBASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 AC025062.2-201ENST00000605477 670 ntBASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 AC073592.4-201ENST00000623827 446 ntBASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FNDC9Q8TBE3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 AC008764.6-201ENST00000595909 2069 ntBASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 KLF4P1-201ENST00000412782 1185 ntBASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 AL022326.1-202ENST00000641533 845 ntBASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 SIGLEC16-201ENST00000599858 1437 ntBASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FNDC9Q8TBE3 REXO1L11P-201ENST00000620964 1927 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms