Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 AC046185.3-201ENST00000623228 1824 ntBASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 IGHV3-52-201ENST00000519770 353 ntBASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 STK25P1-201ENST00000585406 838 ntBASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 AL031008.1-201ENST00000619963 541 ntBASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCC2Q8TAQ2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 AC079781.3-201ENST00000449110 356 ntBASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 AC060834.1-201ENST00000443027 2032 ntBASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCC2Q8TAQ2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 AF238378.1-201ENST00000526806 358 ntBASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCC2Q8TAQ2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMARCC2Q8TAQ2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
SMARCC2Q8TAQ2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMARCC2Q8TAQ2 LINC02012-201ENST00000608206 1725 ntBASIC20.33■□□□□ 0.84
SMARCC2Q8TAQ2 AC093525.9-201ENST00000624961 1746 ntBASIC20.33■□□□□ 0.84
SMARCC2Q8TAQ2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMARCC2Q8TAQ2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.33■□□□□ 0.84
SMARCC2Q8TAQ2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SMARCC2Q8TAQ2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms