Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 AP000867.3-201ENST00000524675 377 ntBASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 STK25P1-201ENST00000585406 838 ntBASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 INTS4P1-201ENST00000438455 1935 ntBASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 BNIP3P18-201ENST00000593976 575 ntBASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 AD001527.2-201ENST00000622994 785 ntBASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.76□□□□□ -0.21
TTC9CQ8N5M4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TTC9CQ8N5M4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TTC9CQ8N5M4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TTC9CQ8N5M4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TTC9CQ8N5M4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TTC9CQ8N5M4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TTC9CQ8N5M4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TTC9CQ8N5M4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TTC9CQ8N5M4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TTC9CQ8N5M4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TTC9CQ8N5M4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TTC9CQ8N5M4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.75□□□□□ -0.21
TTC9CQ8N5M4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms