Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 SDHAP2-201ENST00000455183 2001 ntBASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CROCCP3Q8IVE0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 AC016396.2-201ENST00000562575 1417 ntBASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 TNRC18P2-201ENST00000417666 2714 ntBASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 UNC93B4-201ENST00000505679 747 ntBASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 AL050303.2-201ENST00000619798 666 ntBASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 AC079328.2-201ENST00000561241 3354 ntBASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CROCCP3Q8IVE0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 MIR4758-201ENST00000577688 71 ntBASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 MYC-209ENST00000641252 345 ntBASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.77■□□□□ 0.12
CROCCP3Q8IVE0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 AL163051.1-201ENST00000569214 1512 ntBASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CROCCP3Q8IVE0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms