Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATPAF1Q5TC12 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 PCDHA14-201ENST00000506751 2298 ntBASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 ARMC10P1-201ENST00000313754 855 ntBASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 DUTP2-201ENST00000519164 463 ntBASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 AC005332.3-201ENST00000589904 676 ntBASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 AC116407.4-201ENST00000623319 1061 ntBASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 AC005332.1-201ENST00000577698 1310 ntBASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ATPAF1Q5TC12 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 AC011498.5-201ENST00000592027 486 ntBASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 AL390719.2-201ENST00000606993 987 ntBASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATPAF1Q5TC12 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms