Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 AC108860.2-201ENST00000562760 2183 ntBASIC20.93■□□□□ 0.94
RFX7Q2KHR2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFX7Q2KHR2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.92■□□□□ 0.94
RFX7Q2KHR2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.92■□□□□ 0.94
RFX7Q2KHR2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 AC108073.2-201ENST00000464002 357 ntBASIC20.92■□□□□ 0.94
RFX7Q2KHR2 AC005593.1-201ENST00000624894 515 ntBASIC20.92■□□□□ 0.94
RFX7Q2KHR2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.92■□□□□ 0.94
RFX7Q2KHR2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 AC026471.1-201ENST00000564629 3026 ntBASIC20.91■□□□□ 0.94
RFX7Q2KHR2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.91■□□□□ 0.94
RFX7Q2KHR2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 AC124947.2-201ENST00000547118 1133 ntBASIC20.9■□□□□ 0.94
RFX7Q2KHR2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 AL805961.1-202ENST00000641562 540 ntBASIC20.9■□□□□ 0.94
RFX7Q2KHR2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 LINC02012-201ENST00000608206 1725 ntBASIC20.9■□□□□ 0.94
RFX7Q2KHR2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFX7Q2KHR2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RFX7Q2KHR2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX7Q2KHR2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX7Q2KHR2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RFX7Q2KHR2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 AL353135.1-201ENST00000606729 504 ntBASIC20.89■□□□□ 0.93
RFX7Q2KHR2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.89■□□□□ 0.93
RFX7Q2KHR2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms