Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 TSSK5P-201ENST00000423978 907 ntBASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 KRT17P8-201ENST00000540749 863 ntBASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 AC084121.4-201ENST00000641598 221 ntBASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 AL645728.2-201ENST00000641974 660 ntBASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 AF228730.8-201ENST00000642140 221 ntBASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 ALG1L8P-201ENST00000533887 760 ntBASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 AC140912.1-201ENST00000577171 1054 ntBASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 MIR4453-201ENST00000584019 89 ntBASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 STK25P1-201ENST00000585406 838 ntBASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 AC019129.2-201ENST00000609837 1235 ntBASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 AL161645.1-201ENST00000622716 1255 ntBASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 AC007541.1-201ENST00000570282 1469 ntBASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RSPO4Q2I0M5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 AL512384.1-201ENST00000406683 331 ntBASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 HAUS4P1-201ENST00000406739 1145 ntBASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 AC092552.1-201ENST00000547243 906 ntBASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 SPTSSB-204ENST00000617024 1292 ntBASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 AL033527.4-201ENST00000641026 673 ntBASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO4Q2I0M5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms