Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SSBP1Q04837 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.72□□□□□ -0.05
SSBP1Q04837 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.72□□□□□ -0.05
SSBP1Q04837 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.72□□□□□ -0.05
SSBP1Q04837 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP1Q04837 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.72□□□□□ -0.05
SSBP1Q04837 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP1Q04837 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP1Q04837 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.72□□□□□ -0.05
SSBP1Q04837 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP1Q04837 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.72□□□□□ -0.05
SSBP1Q04837 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP1Q04837 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.72□□□□□ -0.05
SSBP1Q04837 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.72□□□□□ -0.05
SSBP1Q04837 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP1Q04837 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SSBP1Q04837 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP1Q04837 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 AC008894.3-201ENST00000624324 3103 ntBASIC14.72□□□□□ -0.05
SSBP1Q04837 AL365203.3-201ENST00000609742 2057 ntBASIC14.72□□□□□ -0.05
SSBP1Q04837 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.72□□□□□ -0.05
SSBP1Q04837 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP1Q04837 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP1Q04837 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
SSBP1Q04837 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP1Q04837 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP1Q04837 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP1Q04837 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP1Q04837 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.71□□□□□ -0.05
SSBP1Q04837 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP1Q04837 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP1Q04837 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP1Q04837 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
SSBP1Q04837 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SSBP1Q04837 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP1Q04837 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP1Q04837 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.71□□□□□ -0.05
SSBP1Q04837 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP1Q04837 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSBP1Q04837 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
SSBP1Q04837 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.71□□□□□ -0.06
SSBP1Q04837 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSBP1Q04837 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
SSBP1Q04837 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.7□□□□□ -0.06
SSBP1Q04837 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.7□□□□□ -0.06
SSBP1Q04837 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.7□□□□□ -0.06
SSBP1Q04837 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 EGFEM1P-202ENST00000431685 1563 ntBASIC14.7□□□□□ -0.06
SSBP1Q04837 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.7□□□□□ -0.06
SSBP1Q04837 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.7□□□□□ -0.06
SSBP1Q04837 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.7□□□□□ -0.06
SSBP1Q04837 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms