Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN6P56747 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 GGTLC5P-201ENST00000617623 998 ntBASIC16.64■□□□□ 0.25
CLDN6P56747 REXO1L3P-201ENST00000622202 1288 ntBASIC16.64■□□□□ 0.25
CLDN6P56747 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN6P56747 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN6P56747 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLDN6P56747 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN6P56747 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN6P56747 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN6P56747 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN6P56747 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLDN6P56747 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN6P56747 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLDN6P56747 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLDN6P56747 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN6P56747 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN6P56747 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN6P56747 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN6P56747 AC093214.1-201ENST00000511688 1107 ntBASIC16.63■□□□□ 0.25
CLDN6P56747 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN6P56747 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN6P56747 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN6P56747 Z92544.3-201ENST00000624747 417 ntBASIC16.63■□□□□ 0.25
CLDN6P56747 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CLDN6P56747 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN6P56747 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN6P56747 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN6P56747 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN6P56747 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CLDN6P56747 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN6P56747 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN6P56747 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN6P56747 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN6P56747 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN6P56747 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CLDN6P56747 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN6P56747 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 FAM86GP-201ENST00000448322 971 ntBASIC16.62■□□□□ 0.25
CLDN6P56747 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN6P56747 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN6P56747 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN6P56747 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN6P56747 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLDN6P56747 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN6P56747 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.61■□□□□ 0.25
CLDN6P56747 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN6P56747 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLDN6P56747 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
CLDN6P56747 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN6P56747 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN6P56747 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms