Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
SMSP52788 HLA-A-201ENST00000376802 1334 ntBASIC16.33■□□□□ 0.2
SMSP52788 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMSP52788 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMSP52788 AC022898.2-201ENST00000616822 1312 ntBASIC16.33■□□□□ 0.2
SMSP52788 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMSP52788 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMSP52788 AL121761.2-201ENST00000598007 1648 ntBASIC16.33■□□□□ 0.2
SMSP52788 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
SMSP52788 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMSP52788 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.33■□□□□ 0.2
SMSP52788 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.33■□□□□ 0.2
SMSP52788 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMSP52788 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMSP52788 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SMSP52788 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SMSP52788 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
SMSP52788 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SMSP52788 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SMSP52788 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.32■□□□□ 0.2
SMSP52788 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.32■□□□□ 0.2
SMSP52788 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.32■□□□□ 0.2
SMSP52788 CROCCP1-201ENST00000426910 5675 ntBASIC16.32■□□□□ 0.2
SMSP52788 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.32■□□□□ 0.2
SMSP52788 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SMSP52788 AC093909.1-201ENST00000504731 1122 ntBASIC16.32■□□□□ 0.2
SMSP52788 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SMSP52788 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.32■□□□□ 0.2
SMSP52788 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.32■□□□□ 0.2
SMSP52788 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SMSP52788 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SMSP52788 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
SMSP52788 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.32■□□□□ 0.2
SMSP52788 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.32■□□□□ 0.2
SMSP52788 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.32■□□□□ 0.2
SMSP52788 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.32■□□□□ 0.2
SMSP52788 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SMSP52788 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SMSP52788 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
SMSP52788 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMSP52788 AC084018.2-201ENST00000613093 2607 ntBASIC16.32■□□□□ 0.2
SMSP52788 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SMSP52788 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 KRT89P-201ENST00000620027 1478 ntBASIC16.31■□□□□ 0.2
SMSP52788 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 AL353692.3-201ENST00000407031 1396 ntBASIC16.31■□□□□ 0.2
SMSP52788 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.31■□□□□ 0.2
SMSP52788 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SMSP52788 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SMSP52788 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.31■□□□□ 0.2
SMSP52788 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.31■□□□□ 0.2
SMSP52788 RN7SL606P-201ENST00000472779 293 ntBASIC16.31■□□□□ 0.2
SMSP52788 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.31■□□□□ 0.2
SMSP52788 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.31■□□□□ 0.2
SMSP52788 AL773604.1-201ENST00000617417 272 ntBASIC16.31■□□□□ 0.2
SMSP52788 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.31■□□□□ 0.2
SMSP52788 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.31■□□□□ 0.2
SMSP52788 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.31■□□□□ 0.2
SMSP52788 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.31■□□□□ 0.2
SMSP52788 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.31■□□□□ 0.2
SMSP52788 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SMSP52788 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SMSP52788 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.31■□□□□ 0.2
SMSP52788 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMSP52788 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SMSP52788 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 AC022211.2-201ENST00000585075 2527 ntBASIC16.3■□□□□ 0.2
SMSP52788 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMSP52788 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms