Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.8■□□□□ 0.6
PDE6CP51160 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PDE6CP51160 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 FDX1P1-201ENST00000449115 551 ntBASIC18.8■□□□□ 0.6
PDE6CP51160 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.8■□□□□ 0.6
PDE6CP51160 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 AL662844.1-201ENST00000546340 181 ntBASIC18.8■□□□□ 0.6
PDE6CP51160 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.8■□□□□ 0.6
PDE6CP51160 AL591684.3-201ENST00000605187 298 ntBASIC18.8■□□□□ 0.6
PDE6CP51160 AL031008.1-201ENST00000619963 541 ntBASIC18.8■□□□□ 0.6
PDE6CP51160 REXO1L6P-202ENST00000619970 1078 ntBASIC18.8■□□□□ 0.6
PDE6CP51160 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PDE6CP51160 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.8■□□□□ 0.6
PDE6CP51160 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.8■□□□□ 0.6
PDE6CP51160 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6CP51160 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.79■□□□□ 0.6
PDE6CP51160 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.79■□□□□ 0.6
PDE6CP51160 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PDE6CP51160 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PDE6CP51160 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PDE6CP51160 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.79■□□□□ 0.6
PDE6CP51160 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.79■□□□□ 0.6
PDE6CP51160 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PDE6CP51160 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PDE6CP51160 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.79■□□□□ 0.6
PDE6CP51160 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.79■□□□□ 0.6
PDE6CP51160 AC064862.7-201ENST00000604520 867 ntBASIC18.79■□□□□ 0.6
PDE6CP51160 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.79■□□□□ 0.6
PDE6CP51160 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.79■□□□□ 0.6
PDE6CP51160 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PDE6CP51160 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6CP51160 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.78■□□□□ 0.6
PDE6CP51160 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6CP51160 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6CP51160 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6CP51160 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6CP51160 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6CP51160 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6CP51160 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PDE6CP51160 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.78■□□□□ 0.6
PDE6CP51160 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PDE6CP51160 PCDHA12-202ENST00000613593 2588 ntBASIC18.78■□□□□ 0.6
PDE6CP51160 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.78■□□□□ 0.6
PDE6CP51160 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.78■□□□□ 0.6
PDE6CP51160 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.78■□□□□ 0.6
PDE6CP51160 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6CP51160 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PDE6CP51160 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
PDE6CP51160 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.78■□□□□ 0.6
PDE6CP51160 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.78■□□□□ 0.6
PDE6CP51160 MIR5100-201ENST00000579544 119 ntBASIC18.78■□□□□ 0.6
PDE6CP51160 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PDE6CP51160 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.78■□□□□ 0.6
PDE6CP51160 AL139327.4-201ENST00000612362 153 ntBASIC18.78■□□□□ 0.6
PDE6CP51160 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6CP51160 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6CP51160 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6CP51160 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6CP51160 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PDE6CP51160 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6CP51160 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDE6CP51160 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6CP51160 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6CP51160 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PDE6CP51160 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.77■□□□□ 0.6
PDE6CP51160 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PDE6CP51160 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.77■□□□□ 0.6
PDE6CP51160 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6CP51160 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6CP51160 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6CP51160 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6CP51160 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6CP51160 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6CP51160 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms