Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.21□□□□□ -0.13
CEACAM3P40198 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM3P40198 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.21□□□□□ -0.13
CEACAM3P40198 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
CEACAM3P40198 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM3P40198 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.21□□□□□ -0.13
CEACAM3P40198 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.21□□□□□ -0.13
CEACAM3P40198 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
CEACAM3P40198 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.21□□□□□ -0.13
CEACAM3P40198 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM3P40198 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM3P40198 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
CEACAM3P40198 AL139327.4-201ENST00000612362 153 ntBASIC14.21□□□□□ -0.13
CEACAM3P40198 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.21□□□□□ -0.13
CEACAM3P40198 AD001527.2-201ENST00000622994 785 ntBASIC14.21□□□□□ -0.13
CEACAM3P40198 AC073592.5-201ENST00000624854 528 ntBASIC14.21□□□□□ -0.13
CEACAM3P40198 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CEACAM3P40198 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CEACAM3P40198 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CEACAM3P40198 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM3P40198 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM3P40198 KRT8P10-201ENST00000450021 1447 ntBASIC14.21□□□□□ -0.13
CEACAM3P40198 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CEACAM3P40198 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CEACAM3P40198 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CEACAM3P40198 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CEACAM3P40198 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CEACAM3P40198 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CEACAM3P40198 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CEACAM3P40198 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
CEACAM3P40198 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CEACAM3P40198 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.21□□□□□ -0.14
CEACAM3P40198 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.21□□□□□ -0.14
CEACAM3P40198 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.2□□□□□ -0.14
CEACAM3P40198 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.2□□□□□ -0.14
CEACAM3P40198 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CEACAM3P40198 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.2□□□□□ -0.14
CEACAM3P40198 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.2□□□□□ -0.14
CEACAM3P40198 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.2□□□□□ -0.14
CEACAM3P40198 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CEACAM3P40198 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.2□□□□□ -0.14
CEACAM3P40198 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.2□□□□□ -0.14
CEACAM3P40198 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CEACAM3P40198 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CEACAM3P40198 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.2□□□□□ -0.14
CEACAM3P40198 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.2□□□□□ -0.14
CEACAM3P40198 AC132008.2-207ENST00000454517 770 ntBASIC14.2□□□□□ -0.14
CEACAM3P40198 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.2□□□□□ -0.14
CEACAM3P40198 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CEACAM3P40198 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CEACAM3P40198 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.2□□□□□ -0.14
CEACAM3P40198 STK25P1-201ENST00000585406 838 ntBASIC14.2□□□□□ -0.14
CEACAM3P40198 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.2□□□□□ -0.14
CEACAM3P40198 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.2□□□□□ -0.14
CEACAM3P40198 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 AL138688.1-201ENST00000624851 1594 ntBASIC14.2□□□□□ -0.14
CEACAM3P40198 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
CEACAM3P40198 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.2□□□□□ -0.14
CEACAM3P40198 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CEACAM3P40198 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.2□□□□□ -0.14
CEACAM3P40198 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CEACAM3P40198 FER1L4-210ENST00000615531 5998 ntBASIC14.2□□□□□ -0.14
CEACAM3P40198 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.2□□□□□ -0.14
CEACAM3P40198 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CEACAM3P40198 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CEACAM3P40198 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CEACAM3P40198 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CEACAM3P40198 AL133373.2-201ENST00000623187 2828 ntBASIC14.19□□□□□ -0.14
CEACAM3P40198 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CEACAM3P40198 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.19□□□□□ -0.14
CEACAM3P40198 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms