Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
COPB2P35606 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.81■□□□□ 0.76
COPB2P35606 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
COPB2P35606 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.81■□□□□ 0.76
COPB2P35606 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.81■□□□□ 0.76
COPB2P35606 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COPB2P35606 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPB2P35606 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPB2P35606 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.8■□□□□ 0.76
COPB2P35606 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.8■□□□□ 0.76
COPB2P35606 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COPB2P35606 AL354751.1-201ENST00000412768 1863 ntBASIC19.8■□□□□ 0.76
COPB2P35606 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPB2P35606 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.8■□□□□ 0.76
COPB2P35606 FAM58CP-201ENST00000435741 640 ntBASIC19.8■□□□□ 0.76
COPB2P35606 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.8■□□□□ 0.76
COPB2P35606 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.8■□□□□ 0.76
COPB2P35606 AP000344.2-201ENST00000512987 629 ntBASIC19.8■□□□□ 0.76
COPB2P35606 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.8■□□□□ 0.76
COPB2P35606 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.8■□□□□ 0.76
COPB2P35606 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.8■□□□□ 0.76
COPB2P35606 LINC01451-201ENST00000623792 534 ntBASIC19.8■□□□□ 0.76
COPB2P35606 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPB2P35606 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.8■□□□□ 0.76
COPB2P35606 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.8■□□□□ 0.76
COPB2P35606 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COPB2P35606 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPB2P35606 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPB2P35606 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPB2P35606 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.8■□□□□ 0.76
COPB2P35606 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COPB2P35606 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.79■□□□□ 0.76
COPB2P35606 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COPB2P35606 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.79■□□□□ 0.76
COPB2P35606 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.79■□□□□ 0.76
COPB2P35606 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPB2P35606 AL135999.2-201ENST00000622438 1686 ntBASIC19.79■□□□□ 0.76
COPB2P35606 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COPB2P35606 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.79■□□□□ 0.76
COPB2P35606 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
COPB2P35606 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPB2P35606 FAM185BP-201ENST00000443595 716 ntBASIC19.79■□□□□ 0.76
COPB2P35606 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.79■□□□□ 0.76
COPB2P35606 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.79■□□□□ 0.76
COPB2P35606 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.79■□□□□ 0.76
COPB2P35606 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.79■□□□□ 0.76
COPB2P35606 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.79■□□□□ 0.76
COPB2P35606 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.79■□□□□ 0.76
COPB2P35606 AL139327.4-201ENST00000612362 153 ntBASIC19.79■□□□□ 0.76
COPB2P35606 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.79■□□□□ 0.76
COPB2P35606 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPB2P35606 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPB2P35606 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPB2P35606 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPB2P35606 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPB2P35606 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.79■□□□□ 0.76
COPB2P35606 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPB2P35606 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPB2P35606 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPB2P35606 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.79■□□□□ 0.76
COPB2P35606 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.79■□□□□ 0.76
COPB2P35606 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPB2P35606 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPB2P35606 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.78■□□□□ 0.76
COPB2P35606 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.78■□□□□ 0.76
COPB2P35606 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.78■□□□□ 0.76
COPB2P35606 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 PAWRP1-201ENST00000451083 565 ntBASIC19.78■□□□□ 0.76
COPB2P35606 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.78■□□□□ 0.76
COPB2P35606 AL031432.2-201ENST00000566714 459 ntBASIC19.78■□□□□ 0.76
COPB2P35606 AL928711.1-201ENST00000570165 459 ntBASIC19.78■□□□□ 0.76
COPB2P35606 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 AP002472.1-201ENST00000577490 586 ntBASIC19.78■□□□□ 0.76
COPB2P35606 AC068137.2-201ENST00000605408 478 ntBASIC19.78■□□□□ 0.76
COPB2P35606 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
COPB2P35606 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
COPB2P35606 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPB2P35606 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
COPB2P35606 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.77■□□□□ 0.76
COPB2P35606 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms