Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB4AP20338 PRAL-201ENST00000624952 3286 ntBASIC13.37□□□□□ -0.27
RAB4AP20338 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
RAB4AP20338 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB4AP20338 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RAB4AP20338 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB4AP20338 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
RAB4AP20338 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB4AP20338 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RAB4AP20338 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB4AP20338 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RAB4AP20338 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB4AP20338 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB4AP20338 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.36□□□□□ -0.27
RAB4AP20338 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 POU5F1P3-201ENST00000428824 1078 ntBASIC13.36□□□□□ -0.27
RAB4AP20338 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB4AP20338 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB4AP20338 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB4AP20338 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.36□□□□□ -0.27
RAB4AP20338 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB4AP20338 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RAB4AP20338 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 GMCL1P1-201ENST00000463439 1581 ntBASIC13.36□□□□□ -0.27
RAB4AP20338 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RAB4AP20338 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RAB4AP20338 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB4AP20338 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RAB4AP20338 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB4AP20338 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
RAB4AP20338 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 CR383656.2-201ENST00000548656 2254 ntBASIC13.36□□□□□ -0.27
RAB4AP20338 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB4AP20338 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB4AP20338 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB4AP20338 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RAB4AP20338 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB4AP20338 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RAB4AP20338 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RAB4AP20338 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB4AP20338 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB4AP20338 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
RAB4AP20338 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.35□□□□□ -0.27
RAB4AP20338 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB4AP20338 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB4AP20338 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB4AP20338 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.35□□□□□ -0.27
RAB4AP20338 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
RAB4AP20338 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB4AP20338 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB4AP20338 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RAB4AP20338 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RAB4AP20338 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RAB4AP20338 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RAB4AP20338 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms