Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 AC113347.1-201ENST00000413321 391 ntBASIC16.18■□□□□ 0.18
TNFRSF1BP20333 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.18■□□□□ 0.18
TNFRSF1BP20333 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.18■□□□□ 0.18
TNFRSF1BP20333 AL390719.2-201ENST00000606993 987 ntBASIC16.18■□□□□ 0.18
TNFRSF1BP20333 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 AC008741.2-201ENST00000612792 3115 ntBASIC16.18■□□□□ 0.18
TNFRSF1BP20333 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.18■□□□□ 0.18
TNFRSF1BP20333 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 Z83836.1-201ENST00000624605 1642 ntBASIC16.17■□□□□ 0.18
TNFRSF1BP20333 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 BX664615.1-201ENST00000443558 458 ntBASIC16.17■□□□□ 0.18
TNFRSF1BP20333 KRT18P57-201ENST00000443599 1254 ntBASIC16.17■□□□□ 0.18
TNFRSF1BP20333 AC112907.2-201ENST00000448639 330 ntBASIC16.17■□□□□ 0.18
TNFRSF1BP20333 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 AC005363.2-201ENST00000618631 242 ntBASIC16.17■□□□□ 0.18
TNFRSF1BP20333 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 AC066615.1-201ENST00000640911 628 ntBASIC16.17■□□□□ 0.18
TNFRSF1BP20333 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 AC092068.3-201ENST00000587894 2016 ntBASIC16.17■□□□□ 0.18
TNFRSF1BP20333 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.17■□□□□ 0.18
TNFRSF1BP20333 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF1BP20333 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms