Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CCDC172P0C7W6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 AC103564.2-201ENST00000432853 1299 ntBASIC18.82■□□□□ 0.6
CCDC172P0C7W6 RN7SL606P-201ENST00000472779 293 ntBASIC18.82■□□□□ 0.6
CCDC172P0C7W6 DUX4L26-201ENST00000489078 1255 ntBASIC18.82■□□□□ 0.6
CCDC172P0C7W6 AC122714.2-201ENST00000502787 707 ntBASIC18.82■□□□□ 0.6
CCDC172P0C7W6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 AC011840.4-201ENST00000578471 627 ntBASIC18.82■□□□□ 0.6
CCDC172P0C7W6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 AC080080.1-201ENST00000625121 2420 ntBASIC18.82■□□□□ 0.6
CCDC172P0C7W6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 AC116353.5-201ENST00000638148 1699 ntBASIC18.82■□□□□ 0.6
CCDC172P0C7W6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC172P0C7W6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 AC007967.3-201ENST00000434308 558 ntBASIC18.81■□□□□ 0.6
CCDC172P0C7W6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 AL136038.3-201ENST00000561909 1096 ntBASIC18.81■□□□□ 0.6
CCDC172P0C7W6 AC111152.3-201ENST00000569699 673 ntBASIC18.81■□□□□ 0.6
CCDC172P0C7W6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 AL353801.3-201ENST00000609898 542 ntBASIC18.81■□□□□ 0.6
CCDC172P0C7W6 IGHV3-41-201ENST00000613121 348 ntBASIC18.81■□□□□ 0.6
CCDC172P0C7W6 AC124864.1-201ENST00000623408 392 ntBASIC18.81■□□□□ 0.6
CCDC172P0C7W6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC172P0C7W6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms