Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.83■□□□□ 0.28
CLDN9O95484 TP73-AS1-210ENST00000637775 1455 ntBASIC16.83■□□□□ 0.28
CLDN9O95484 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN9O95484 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLDN9O95484 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN9O95484 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CLDN9O95484 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CLDN9O95484 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN9O95484 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN9O95484 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDN9O95484 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLDN9O95484 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDN9O95484 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN9O95484 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN9O95484 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN9O95484 SLC25A1P3-201ENST00000395415 828 ntBASIC16.82■□□□□ 0.28
CLDN9O95484 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN9O95484 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLDN9O95484 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN9O95484 AP002383.4-201ENST00000442518 975 ntBASIC16.82■□□□□ 0.28
CLDN9O95484 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLDN9O95484 MINOS1P3-201ENST00000457048 203 ntBASIC16.82■□□□□ 0.28
CLDN9O95484 STK19B-204ENST00000512515 211 ntBASIC16.82■□□□□ 0.28
CLDN9O95484 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN9O95484 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN9O95484 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN9O95484 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CLDN9O95484 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CLDN9O95484 AP002414.4-201ENST00000589764 1148 ntBASIC16.82■□□□□ 0.28
CLDN9O95484 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDN9O95484 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 AC060834.1-201ENST00000443027 2032 ntBASIC16.82■□□□□ 0.28
CLDN9O95484 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN9O95484 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDN9O95484 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN9O95484 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN9O95484 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLDN9O95484 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN9O95484 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN9O95484 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.81■□□□□ 0.28
CLDN9O95484 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 KRT17P6-201ENST00000453795 1220 ntBASIC16.81■□□□□ 0.28
CLDN9O95484 TOB2P1-201ENST00000469761 992 ntBASIC16.81■□□□□ 0.28
CLDN9O95484 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN9O95484 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN9O95484 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN9O95484 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CLDN9O95484 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.81■□□□□ 0.28
CLDN9O95484 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN9O95484 AD001527.2-201ENST00000622994 785 ntBASIC16.81■□□□□ 0.28
CLDN9O95484 AP000550.4-202ENST00000639755 178 ntBASIC16.81■□□□□ 0.28
CLDN9O95484 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLDN9O95484 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLDN9O95484 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN9O95484 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN9O95484 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN9O95484 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN9O95484 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN9O95484 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN9O95484 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN9O95484 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN9O95484 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms