Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF3O95398 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF3O95398 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF3O95398 AC092658.1-201ENST00000505836 891 ntBASIC25.72■■□□□ 1.71
RAPGEF3O95398 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF3O95398 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC25.72■■□□□ 1.71
RAPGEF3O95398 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
RAPGEF3O95398 NKG7-205ENST00000600427 520 ntTSL 3 BASIC25.72■■□□□ 1.71
RAPGEF3O95398 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC25.72■■□□□ 1.71
RAPGEF3O95398 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.72■■□□□ 1.71
RAPGEF3O95398 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC25.72■■□□□ 1.71
RAPGEF3O95398 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC25.72■■□□□ 1.71
RAPGEF3O95398 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF3O95398 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF3O95398 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC25.72■■□□□ 1.71
RAPGEF3O95398 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF3O95398 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF3O95398 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RAPGEF3O95398 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC25.71■■□□□ 1.71
RAPGEF3O95398 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF3O95398 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF3O95398 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF3O95398 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC25.71■■□□□ 1.71
RAPGEF3O95398 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF3O95398 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
RAPGEF3O95398 AL512384.1-201ENST00000406683 331 ntBASIC25.71■■□□□ 1.71
RAPGEF3O95398 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC25.71■■□□□ 1.71
RAPGEF3O95398 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC25.71■■□□□ 1.71
RAPGEF3O95398 HLA-V-204ENST00000476601 1289 ntBASIC25.71■■□□□ 1.71
RAPGEF3O95398 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC25.71■■□□□ 1.71
RAPGEF3O95398 RARRES2P9-201ENST00000565168 469 ntBASIC25.71■■□□□ 1.71
RAPGEF3O95398 AC004840.1-201ENST00000636359 365 ntBASIC25.71■■□□□ 1.71
RAPGEF3O95398 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC25.71■■□□□ 1.71
RAPGEF3O95398 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
RAPGEF3O95398 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC25.71■■□□□ 1.71
RAPGEF3O95398 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF3O95398 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF3O95398 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF3O95398 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RAPGEF3O95398 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC25.71■■□□□ 1.71
RAPGEF3O95398 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RAPGEF3O95398 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RAPGEF3O95398 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC25.7■■□□□ 1.71
RAPGEF3O95398 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
RAPGEF3O95398 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RAPGEF3O95398 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
RAPGEF3O95398 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC25.7■■□□□ 1.7
RAPGEF3O95398 SLC25A6P5-201ENST00000435663 894 ntBASIC25.7■■□□□ 1.7
RAPGEF3O95398 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC25.7■■□□□ 1.7
RAPGEF3O95398 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC25.7■■□□□ 1.7
RAPGEF3O95398 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RAPGEF3O95398 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
RAPGEF3O95398 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
RAPGEF3O95398 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC25.7■■□□□ 1.7
RAPGEF3O95398 AC104794.3-201ENST00000566840 1248 ntBASIC25.7■■□□□ 1.7
RAPGEF3O95398 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RAPGEF3O95398 AL844908.2-201ENST00000609461 460 ntBASIC25.7■■□□□ 1.7
RAPGEF3O95398 AC003101.2-201ENST00000612557 442 ntBASIC25.7■■□□□ 1.7
RAPGEF3O95398 AC007967.4-201ENST00000614700 386 ntBASIC25.7■■□□□ 1.7
RAPGEF3O95398 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC25.7■■□□□ 1.7
RAPGEF3O95398 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC25.7■■□□□ 1.7
RAPGEF3O95398 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RAPGEF3O95398 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC25.7■■□□□ 1.7
RAPGEF3O95398 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
RAPGEF3O95398 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RAPGEF3O95398 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC25.7■■□□□ 1.7
RAPGEF3O95398 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC25.69■■□□□ 1.7
RAPGEF3O95398 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF3O95398 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF3O95398 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.69■■□□□ 1.7
RAPGEF3O95398 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF3O95398 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF3O95398 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC25.69■■□□□ 1.7
RAPGEF3O95398 POR-209ENST00000439269 1858 ntTSL 2 BASIC25.69■■□□□ 1.7
RAPGEF3O95398 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC25.69■■□□□ 1.7
RAPGEF3O95398 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF3O95398 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF3O95398 AC142381.1-201ENST00000426099 345 ntBASIC25.69■■□□□ 1.7
RAPGEF3O95398 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC25.69■■□□□ 1.7
RAPGEF3O95398 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC25.69■■□□□ 1.7
RAPGEF3O95398 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF3O95398 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
RAPGEF3O95398 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC25.69■■□□□ 1.7
RAPGEF3O95398 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF3O95398 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC25.69■■□□□ 1.7
RAPGEF3O95398 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF3O95398 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF3O95398 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF3O95398 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF3O95398 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC25.68■■□□□ 1.7
RAPGEF3O95398 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
RAPGEF3O95398 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC25.68■■□□□ 1.7
RAPGEF3O95398 AC022210.1-201ENST00000449856 793 ntBASIC25.68■■□□□ 1.7
RAPGEF3O95398 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
RAPGEF3O95398 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF3O95398 KRT17P8-201ENST00000540749 863 ntBASIC25.68■■□□□ 1.7
RAPGEF3O95398 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC25.68■■□□□ 1.7
RAPGEF3O95398 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC25.68■■□□□ 1.7
RAPGEF3O95398 MIR4259-201ENST00000584466 101 ntBASIC25.68■■□□□ 1.7
RAPGEF3O95398 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms