Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 GUSBP12-201ENST00000513727 720 ntBASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 AC092329.2-201ENST00000598402 547 ntBASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 AL390719.2-201ENST00000606993 987 ntBASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 Z83836.1-201ENST00000624605 1642 ntBASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 BX276092.7-203ENST00000637198 1536 ntBASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 AC068472.1-201ENST00000474589 881 ntBASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 AC009949.1-201ENST00000623048 1830 ntBASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB3Q9Y5G1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 TSPY22P-201ENST00000427496 604 ntBASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 DUSP5P1-201ENST00000441325 1139 ntBASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 CLEC4GP1-201ENST00000596555 870 ntBASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PCDHGB3Q9Y5G1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 AC090616.6-201ENST00000582640 721 ntBASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB3Q9Y5G1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGB3Q9Y5G1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms