Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DNAJC28Q9NX36 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DNAJC28Q9NX36 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.7■□□□□ 0.42
DNAJC28Q9NX36 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 TNRC18P3-201ENST00000441896 2691 ntBASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 AC011676.5-201ENST00000624864 2660 ntBASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 AC133963.1-201ENST00000504166 1679 ntBASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 MTDHP3-201ENST00000594186 672 ntBASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAJC28Q9NX36 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 AL031284.1-201ENST00000419297 478 ntBASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 AC125634.1-201ENST00000438758 1403 ntBASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 AL355877.3-201ENST00000622820 899 ntBASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 AC148477.8-201ENST00000624298 468 ntBASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.68■□□□□ 0.42
DNAJC28Q9NX36 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 INTS4P1-201ENST00000438455 1935 ntBASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 RBM17P3-201ENST00000417687 1192 ntBASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 AC093909.1-201ENST00000504731 1122 ntBASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 AC073648.2-201ENST00000510116 352 ntBASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 AC112698.1-201ENST00000510299 916 ntBASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.67■□□□□ 0.42
DNAJC28Q9NX36 AP001269.4-201ENST00000609611 512 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms