Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.18■□□□□ 0.98
ECHDC1Q9NTX5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 LINC00982-205ENST00000420957 435 ntBASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 AC104692.2-201ENST00000603054 253 ntBASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.17■□□□□ 0.98
ECHDC1Q9NTX5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ECHDC1Q9NTX5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 AC090340.1-201ENST00000620778 4980 ntBASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 FAM197Y8-203ENST00000450145 560 ntBASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 RNPS1P1-201ENST00000507437 918 ntBASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 AL589182.2-201ENST00000619332 1049 ntBASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ECHDC1Q9NTX5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms