Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 SDHAP3-202ENST00000515467 728 ntBASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 AP001258.2-201ENST00000529891 490 ntBASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 AC107918.2-201ENST00000530817 355 ntBASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 AC010319.3-201ENST00000597028 470 ntBASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 AC091271.1-201ENST00000611877 1162 ntBASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 AL662890.1-201ENST00000396818 632 ntBASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.38■□□□□ 0.37
COL25A1Q9BXS0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL25A1Q9BXS0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 AC091046.1-201ENST00000331871 207 ntBASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 TPRX2P-201ENST00000535362 881 ntBASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 MIR4750-201ENST00000584564 56 ntBASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL25A1Q9BXS0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms