Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 LINC02012-201ENST00000608206 1725 ntBASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 AGGF1P2-201ENST00000426656 2106 ntBASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CCDC83Q8IWF9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 MYCLP1-201ENST00000372451 1075 ntBASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 AC122714.2-201ENST00000502787 707 ntBASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 AP005901.3-202ENST00000581653 237 ntBASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC83Q8IWF9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
CCDC83Q8IWF9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
CCDC83Q8IWF9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 FAM86EP-206ENST00000510506 987 ntBASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 AL121956.5-201ENST00000625261 221 ntBASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 AC016734.2-201ENST00000624325 1377 ntBASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC83Q8IWF9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 FAM220CP-201ENST00000395253 831 ntBASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 BX276092.5-203ENST00000456199 560 ntBASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC83Q8IWF9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC83Q8IWF9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms